WebApr 22, 2024 · When you calculate diversity with indices vegan::fisher.alpha(otu_table(GAGA_ampSeq.physeq.rarefy)[1:10,23:24]), you ask diversity for ten rows (1:10), each index based on two species 23:24, and many of these rows are double zeros.Similarly, also in your first example, you only have five species … WebDownload scientific diagram 13 Fisher's alpha-diversity coefficient (Fisher et al. 1943) plotted against mean flood height (a) and mean stand age (b) of várzea forest plots (Wittmann et al ...
fisher.alpha when abundance and species richness are 0 - GitHub
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